Schatz Laboratory

iGenomics
Aspyn Palatnick, Elodie Ghedin & Michael Schatz

iGenomics was developed by Aspyn Palatnick and Michael Schatz. It follows the state of the algorithms developed in genomics, and is based off these critical papers:

»	Fast gapped-read alignment with Bowtie 2 Langmead B and Salzberg S. (2012) Nature Methods. 9, 357–359 (2012) doi:10.1038/nmeth.1923

»	The Sequence Alignment/Map format and SAMtools. Li, H et al. (2009) Bioinformatics. 25 (16): 2078-2079. doi: 10.1093/bioinformatics/btp352

»	Integrative genomics viewer Robinson, JT et al. (2011) Nature Biotechnology. 29, 24–26 (2011) doi:10.1038/nbt.1754

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iGenomics
Mobile DNA Sequence Analysis
E-mail: mschatz <at> cshl.edu
Twitter: @mike_schatz